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Transitioning from Google Life Sciences API to Batch

Posted on 09-06-2023 12:16 PM
mbabins
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Reply posted on --/--/---- --:-- AM

Hey, 

Recently set up cromwell on GCP for omic processing workflows following this architecture:

mbabins_0-1694027519702.png

The architecture leverages the Google Life Sciences API which is going to be deprecated as of July, 2025. 

Was wondering if anyone has any suggestions / resources of moving from this architecture to using GCP Batch for large scale data processing with cromwell and WDL. Thanks!

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